In this video, I describe the mechanisms underlying neurotransmitter release. I discuss how calcium influx is thought to play a role in mobilizing and preparing synaptic vesicles for neurotransmitter release, and I cover the hypothesized mechanism by which vesicles fuse with the cell membrane of the neuron to empty their contents into the synaptic cleft.
Welcome to Neuroscientifically Challenged! All of the content for the site is collected on this home page, but if you're looking for specific types of content you can use the menu bar above. By clicking on Articles, you'll find links to blog articles on a variety of different neuroscience topics. The Know Your Brain link will take you to a listing of reference articles, each of which deals with a different part of the nervous system. Clicking on the 2-Minute Neuroscience Videos link will take you to an assortment of 2-minute videos that each teach you about a different aspect of neuroscience. And the Glossary contains a large selection of definitions for common neuroscience terms.
Where is the preoptic area?
Functionally, the preoptic area is considered to be a region of the hypothalamus even though its embryological origins are as part of the telencephalon (rather than the diencephalon like the rest of the hypothalamus). It consists of the area of the hypothalamus that is situated at the very anterior (i.e. front) of the structure, and it extends back from the anterior of the hypothalamus to the posterior edge of the optic chiasm, the point where the optic nerves from the two eyes meet.
The preoptic area, like the rest of the hypothalamus, is a very functionally diverse region. This diversity is represented by the division of the preoptic area into a collection of distinct nuclei. The majority of the research into the preoptic area, however, has been done in rodents; it is not as well understood in humans. This has caused the anatomical differentiation of the preoptic area to not be completely consistent when applied to the human brain and has generated some disagreement, for example, as to which areas of the human preoptic area are homologous to those of the rat brain.
What is the preoptic area and what does it do?
As mentioned above, the preoptic area consists of several nuclei (each of which are often divided into subnuclei), and thus is a very functionally heterogeneous region. To attempt to simplify it, I will discuss the functions most commonly attributed to what are generally considered the major nuclei of the preoptic area (e.g. the median, periventricular, medial, and ventrolateral nuclei). The preoptic area is still not very well understood in humans, however, so the functions listed here will not be a comprehensive list of all that the preoptic area is involved in. Additionally, because most of the attempts to elucidate the function of the preoptic area has been done in rodents, it is still unclear if some of the functionality I will discuss can be said to describe the preoptic area in humans.
The median preoptic nucleus is found near the midline of the brain and at the very anterior end of the hypothalamus, where it borders the third ventricle. It merges and is neurally connected with a structure called the organum vasculosum, and it also receives input from another structure called the subfornical organ. The organum vasculosum and the subfornical organ are both part of a group of structures known as circumventricular organs. These structures lack a blood-brain barrier and thus can detect the levels of substances (e.g. sodium, hormones) in the blood, then pass this information on to the brain. The median preoptic nucleus is thought to receive such information from the organum vasculosum and subfornical organ and then seems to be involved in using that information to help regulate blood composition and volume, both through mechanisms of hormone release and through behavior like drinking.
The median preoptic nucleus also appears to play a role in the regulation of body temperature. Rodent studies suggest neurons in the median preoptic nucleus receive information regarding skin temperature and then send projections to neurons in the medulla that are involved in mechanisms that influence body temperature.
Just below the median preoptic nucleus is the preoptic periventricular nucleus. The preoptic periventricular nucleus is poorly defined anatomically (its boundaries vary depending on species) and poorly understood functionally. Some consider it to be equivalent to an area called the anteroventral periventricular nucleus, which is thought to be involved with sex-specific physiology and behavior, but according to other sources it is a separate location. There is limited information available on the preoptic periventricular nucleus as a stand-alone structure when it is not considered as part of the anteroventral periventricular nucleus or other nuclei nearby.
Lateral to the median preoptic nucleus is the medial preoptic nucleus. The medial preoptic nucleus is the largest collection of preoptic area neurons. It has been linked to a list of actions ranging from regulation of cardiovascular function to regulation of body temperature and fluid balance and water intake. This region, however, is best known for its association with reproductive and parental behavior.
The medial preoptic nucleus is often divided into subnuclei, and the central medial preoptic nucleus in the rat is sometimes called the sexually dimorphic nucleus, as it has been found to be larger in males than females. This observation has also been replicated in a number of other species. Although this has not been seen as consistently in humans, researchers have identified potential homologous regions in the human medial preoptic area that also have been observed to exhibit sexual dimorphism.
The sexually dimorphic nucleus in rodents has been linked to male sexual behavior and male partner preference. Lesions to different parts of this region have been found to eliminate male copulatory behavior and inhibit sexual desire. Additionally, damage to the sexually dimorphic nucleus in male ferrets was associated with their sexually-motivated seeking of same-sex males rather than females. In a study of sheep (which are unique in that ~8% of rams display a consistent preference for male sexual partners), it was found that the sexually dimorphic nucleus was twice as large in female-oriented rams than in male-oriented (i.e. homosexual) rams.
These findings, of course, have led to speculation that the sexually dimorphic nucleus in humans may also be linked to sexual preference. Although there has been some debate as to what the human homolog of the rat sexually dimorphic nucleus actually is, there have been studies that have found sexual dimorphism among preoptic regions in humans. Some studies have also observed differences in size in these regions between heterosexual and homosexual men. These findings, however, have not been seen consistently from study to study, and need to be confirmed before we can be confident in them.
Additionally, the central medial preoptic nucleus has been linked to parental behavior in rodents, sheep, and other mammals. For example, damage to the connections of the medial preoptic nucleus can disrupt parental behaviors like nest building and pup retrieval (i.e. collecting stray pups when they wander from the nest) in rodents. And activation of medial preoptic neurons mitigates male aggression toward pups as well as stimulates the grooming of pups.
Just above the optic chiasm is another nucleus that is known as the ventrolateral preoptic nucleus in rodents. It is generally considered to be homologous with a nucleus in the human brain called the intermediate nucleus, and this cell group actually overlaps with the nuclei discussed above that are thought to be sexually dimorphic in the human brain. This region is thought to play an important role in sleep regulation. Damage to the ventrolateral preoptic nucleus can cause sleep disruptions in a variety of mammalian species. One hypothesis is that ventrolateral preoptic neurons extend to brain regions involved in arousal; through the release of inhibitory neurotransmitters like GABA, the ventrolateral preoptic nucleus can inhibit the activity of these regions to promote sleep. The median preoptic area (discussed above) is also thought to potentially contribute to the induction of sleep.
The preoptic area consists of a collection of nuclei that are interconnected with numerous other hypothalamic regions and other regions of the brain. The anatomy and function of the preoptic area is still being worked out, and the functions presented here are just a short and very abridged list of everything the preoptic region is likely involved in. Additionally, due to the inconsistency in definitions of preoptic nuclei in the human hypothalamus, it is possible some of the definitions discussed above will change with further research into the preoptic area.
In 1860, when John Hughlings Jackson was just beginning his career as a physician, neurology did not yet exist as a medical specialty. In fact, at that time there had been little attention paid to developing a standard approach to treating patients with neurological disease. Such an approach was one of Jackson's greatest contributions to neuroscience. He advocated for examining each patient individually in an attempt to identify the biological underpinnings of neurological disorders. This examination, Jackson asserted, should be guided by the tenets of localization of function, which had been popularized by Franz Joseph Gall in the decades before Jackson was born. Concordant with these tenets, Jackson believed that neurological dysfunction could be traced back to dysfunction in specific foci of the nervous system, and the ability to identify the part of the nervous system that was affected to produce a disease was critical for making an accurate diagnosis.
Jackson's perspective on understanding neurological diseases is exemplified by his efforts to elucidate the neurobiological origins of epilepsy---the work he is probably best known for. Jackson's observations on epilepsy date back to the very beginning of his medical career. At that time, the most popular explanation for epileptic seizures was that they were associated with abnormal function in a region of the brain known as the corpus striatum, a term that refers to a composite structure consisting of the striatum and the globus pallidus. The corpus striatum was known to be involved with motor functions, which caused it to be implicated in epileptic seizures as well.
Jackson, however, began to suspect that the cerebral cortex participated in creating the convulsions that epileptics suffered from during seizures. To support this hypothesis, he cited cases where patients experienced convulsions that primarily struck one side of the body. Very often, Jackson argued, these patients upon autopsy would display damage to the cerebral hemisphere on the opposite side of the body that was affected by seizures.
Jackson approached the idea that there were certain areas of the cortex devoted to movement with hesitancy for multiple reasons. First, at the time the prevailing view was still that the cortex was unexcitable, and thus would be unlikely to be affected by what Jackson considered to be a disease of increased excitability. Additionally, it was still common in Jackson's time to consider the cortex to be homogenous. Although the concept of localization of function was challenging this idea, many still held the belief that all gray matter in the cortex was equivalent and there were no areas of functional specialization. According to this view, the entire mass of the cortex had to act together to produce some sort of response. Jackson's idea that seizures could be linked to increased excitability in one half of the cortex did not conform to this perspective.
In addition to his observations about the link between hemispheric damage and seizures on the other side of the body, Jackson also noted a unique feature of some of the seizures he observed. He pointed out that in certain patients convulsions started in one specific area of the body and then proceeded to travel outward from that area in a predictable fashion. For example, convulsions might begin in the hand and then move up the arm to the face, and then down the same leg on the same side of the body. Or they might start in the foot and travel up the leg, then down the arm and into the hand on the same side of the body.
This process, later called the Jacksonian march, would help Jackson to formulate some of his most important ideas about the brain. He hypothesized that there were areas of the cortex that were devoted to controlling the movement of different parts of the body. When excitation spreads throughout the cortex, Jackson posited, it stimulates these different areas one by one, creating the Jacksonian march of convulsions through the patient's body. Furthermore, Jackson suggested that the parts of the body that were capable of the most diverse movements (e.g. hand, face, foot) likely had the most space in the cortex devoted to them.
With his observations on epilepsy Jackson was essentially predicting the existence of the motor cortex as well as anticipating the functional arrangement of the gray matter that the motor cortex is made up of. His hypothesis that there was a distinct region of the cerebral cortex devoted to motor function was confirmed in 1870 when Gustav Fritsch and Eduard Hitzig provided experimental evidence of a motor cortex in dogs. The arrangement Jackson envisioned, where one part of the cortex is devoted to one part of the body, we now call somatotopic arrangement. It has been verified by a series of experiments, capped by Wilder Penfield's electrical stimulation studies of the 1930s. It is now common neuroscience knowledge that there are regions of the motor cortex that seem to be devoted specifically to movement of the hands, other regions devoted to the movement of the face, and so on. As Jackson predicted, areas of the body that are involved in more diverse movements generally have more cortical area devoted to them.
Jackson's clinical observations of epilepsy and his hypotheses about the motor regions in the cortex accurately predicted what would soon be discovered through experimentation, and acted as a guide for researchers like Fritsch and Hitzig. Thus, Jackson's work contributed significantly to a better understanding of the organization of the cortex, a region that we now consider to be functionally diverse and intricately arranged---a far cry from the idea of cortical homogeneity common in Jackson's time. Additionally, Jackson's development of a more formalized methodology of observation in neurology has caused him to be considered one of the founding fathers of the field.
Jackson's contributions to neuroscience, however, were much more extensive than there is room to cover here. He wrote copiously on diverse topics ranging from the evolution of the nervous system to aphasia. At a time when our understanding of the brain was still so lacking in comparison to today, Jackson had a brilliant mind that seemed capable of comprehending brain function in a way that has rarely been replicated in the history of neuroscience.
Finger, S. Origins of Neuroscience. New York, NY: Oxford University Press; 1994.
Long-term potentiation, or LTP, is a process by which synaptic connections between neurons become stronger with frequent activation. LTP is thought to be a way in which the brain changes in response to experience, and thus may be an mechanism underlying learning and memory. In this video, I discuss one type of LTP: NMDA-receptor dependent LTP. I outline the mechanism underlying NMDA-receptor LTP and describe how it is thought to strengthen synaptic connections where it occurs.
Where is the midbrain?
The midbrain is one of the three subdivisions of the brainstem; it is the most rostral of these subdivisions, or the one that is closest to the top of the brainstem. The midbrain connects the brainstem to the diencephalon at a location sometimes called the midbrain-diencephalon junction.
What is the midbrain and what does it do?
Although it is a relatively small section of neural tissue, the midbrain contains a long list of nuclei, tracts, nerves, and other structures---each with its own diverse catalog of functions. Thus, any attempt to define all of the actions of the midbrain in a just a few sentences, paragraphs, or even pages is inherently inadequate. Rather than attempt to do that, I will simply discuss some of the most prominent anatomical features of the midbrain and some of their putative functions.
One of the most noticeable external features of the midbrain is the presence of four bumps on its posterior surface (the side that faces the back of the brain). Those bumps are indicative of the presence of four large underlying clusters of neurons; the upper pair of those clusters are known as the superior colliculi and the lower pair are known as the inferior colliculi. The superior colliculi are thought to be involved in directing behavioral responses toward stimuli in the environment, while the inferior colliculi are best known for their role in auditory processing.
The anterior surface of the midbrain is marked by the presence of the crura cerebri (plural for crus cerebri), two large bundles of axons that travel along the base of the midbrain as they stretch from the pons to the cerebral hemispheres. They contain fibers that are part of important motor pathways like the corticospinal and corticobulbar tracts. The crura cerebri are sometimes called the cerebral peduncles, although this term is generally used to refer to a larger area that includes the crura cerebri as well as much of the rest of the midbrain.
The midbrain is often divided into three regions. At the level of the midbrain, the fourth ventricle has narrowed to form the cerebral aqueduct, a channel that connects the fourth ventricle with the third ventricle. The region of the midbrain posterior to the cerebral aqueduct is called the tectum, which means "roof" in Latin. The tectum consists primarily of the superior and inferior colliculi.
The area of the midbrain anterior to, or in front of, the cerebral aqueduct is called the tegmentum. The tegmentum contains a variety of ascending and descending tracts that pass through the midbrain, such as the medial lemniscus and the anterolateral tracts. Fibers from the superior cerebellar peduncles, the major efferent pathway from the cerebellum, decussate in the midbrain. Some of these fibers project to a midbrain nucleus called the red nucleus, which is thought to play an important role in motor coordination.
There are several other important nuclei and neuronal clusters in the midbrain tegmentum. For example, the midbrain tegmentum contains nuclei for two cranial nerves: cranial nerve III (oculomotor nerve) and cranial nerve IV (trochlear nerve). It also contains neurons that are part of the raphe nuclei---clusters of serotonin-producing neurons found in the brainstem that send serotonin throughout the central nervous system. Additionally, one of the largest collections of dopamine-producing neurons in the brain, the ventral tegmental area, is located in the midbrain tegmentum.
The third region of the midbrain is made up of two structures called the basis pedunculi. They cover the anterolateral portions (to the front and toward the sides) of the brainstem. The basis pedunculi include the crura cerebri (discussed above) as well as the substantia nigrae, which---like the ventral tegmental area---contain large collections of dopamine-producing neurons.
Finally, the area surrounding the cerebral aqueduct is called the periaqueductal gray, or PAG. The PAG has long been recognized for its role in pain inhibition, although it is also thought to be involved in many other functions ranging from emotional responses to the production of vocalizations.
Haines DE. Fundamental Neuroscience for Basic and Clinical Applications. 4th ed. Philadelphia, PA: Elsevier; 2013.
Vanderah TW, Gould DJ. Nolte's The Human Brain. 7th ed. Philadelphia, PA: Elsevier; 2016.